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Aja-Fernández, S., and K. Krissian, "An unbiased Non-Local Means scheme for DWI filtering", Proceedings of the Medical Image Computing and Computer Assisted Intervention: Workshop on Computational Diffusion MRI, pp. 277–284, 2008.
Aja-Fernández, S., R. de Luis-García, M. Angel Martin-Fernandez, and C. Alberola-Lopez, "A computational TW3 classifier for skeletal maturity assessment. A Computing with Words approach", Journal of Biomedical Informatics, vol. 37, no. 2: Academic Press, pp. 99–107, 2004.
Aja-Fernández, S., G. Vegas-Sánchez-Ferrero, R. de Luis-García, and A. Tristán-Vega, "Noise estimation in magnetic resonance SENSE reconstructed data", Engineering in Medicine and Biology Society (EMBC), 2013 35th Annual International Conference of the IEEE: IEEE, pp. 1104–1107, 2013.
Aja-Fernández, S., A. H. Curiale, and G. Vegas-Sánchez-Ferrero, "A local fuzzy thresholding methodology for multiregion image segmentation", Knowledge-Based Systems, vol. 83, pp. 1-12, 07/2015.
Aja-Fernández, S., A. Tristán-Vega, and W. Scott Hoge, "Statistical noise model in GRAPPA-reconstructed images", Proceedings of the International Society of Magnetic Resonance in Medicine, pp. 3859, 2010.
Aja-Fernández, S., and C. Alberola-Lopez, "On the estimation of the coefficient of variation for anisotropic diffusion speckle filtering", Image Processing, IEEE Transactions on, vol. 15, no. 9: IEEE, pp. 2694–2701, 2006.
Aja-Fernández, S., C. Alberola-Lopez, and C-F. Westin, "Noise and signal estimation in magnitude MRI and Rician distributed images: a LMMSE approach", Image Processing, IEEE Transactions on, vol. 17, no. 8: IEEE, pp. 1383–1398, 2008.
Aja-Fernández, S., and C. Alberola-Lopez, "Hierarchical fuzzy systems with FITM", Fuzzy Systems, 2004. Proceedings. 2004 IEEE International Conference on, vol. 2: IEEE, pp. 767–772, 2004.
Aja-Fernández, S., R. de Luis-García, D. Tao, and X. Li, Tensors in image processing and computer vision: Springer, 2009.
Aja-Fernández, S., C. Alberola-Lopez, and G. V. Cybenko, "A fuzzy MHT algorithm applied to text-based information tracking", Fuzzy Systems, IEEE Transactions on, vol. 10, no. 3: IEEE, pp. 360–374, 2002.
Aja-Fernández, S., G. Vegas-Sánchez-Ferrero, and A. Tristán-Vega, "Statistical Noise Analysis in SENSE Parallel MRI", arXiv preprint arXiv:1402.4067, 2014.
Aja-Fernández, S., and A. Tristán-Vega, "Influence of noise correlation in multiple-coil statistical models with sum of squares reconstruction", Magnetic Resonance in Medicine, vol. 67, no. 2: Wiley Subscription Services, Inc., A Wiley Company, pp. 580–585, 2012.
Aja-Fernández, S., and C. Alberola-Lopez, "Matrix Inference in Fuzzy Decision Trees.", EUSFLAT Conf., pp. 979–984, 2005.
Aja-Fernández, S., R. San Jose-Estepar, C. Alberola-Lopez, and C-F. Westin, "Image quality assessment based on local variance", Proc 28th IEEE Int. Conf. Eng. Med. Biol. Soc.(EMBC), pp. 4815–4818, 2006.
Aja-Fernández, S., T. Pieciak, and G. Vegas-Sánchez-Ferrero, "Spatially variant noise estimation in MRI: A homomorphic approach", Medical Image Analysis, vol. 20, pp. 184 - 197, 2015.
Aja-Fernández, S., Ó. Peña-Nogales, and R. de Luis-García, "Effect of sampling on the estimation of the apparent coefficient of diffusion in MRI", ICASSP 2017, New Orleans, LA, IEEE signal processing Society, 2017.
Aja-Fernández, S., and C. Alberola-Lopez, "Fuzzy feedback system analysis using transition matrices", Fuzzy sets and systems, vol. 157, no. 4: Elsevier, pp. 516–543, 2006.
Aja-Fernández, S., and C. Alberola-Lopez, "Fast inference using transition matrices: An extension to nonlinear operators", Fuzzy Systems, IEEE Transactions on, vol. 13, no. 4: IEEE, pp. 478–490, 2005.
Aja-Fernández, S., and C. Alberola-Lopez, "Inference with fuzzy granules for computing with words: a practical viewpoint", Fuzzy Systems, 2003. FUZZ'03. The 12th IEEE International Conference on, vol. 1: IEEE, pp. 566–571, 2003.
Aja-Fernández, S., A. Tristán-Vega, and C. Alberola-Lopez, "Noise estimation in single-and multiple-coil magnetic resonance data based on statistical models", Magnetic resonance imaging, vol. 27, no. 10: Elsevier, pp. 1397–1409, 2009.
Aja-Fernández, S., C. Alberola-Lopez, and C-F. Westin, "Signal LMMSE estimation from multiple samples in MRI and DT-MRI", Medical Image Computing and Computer-Assisted Intervention–MICCAI 2007: Springer Berlin Heidelberg, pp. 368–375, 2007.
Aja-Fernández, S., G. Vegas-Sánchez-Ferrero, and M. Fernandez, "Soft thresholding for medical image segmentation", Engineering in Medicine and Biology Society (EMBC), 2010 Annual International Conference of the IEEE: IEEE, pp. 4752–4755, 2010.
Aja-Fernández, S., A. Tristán-Vega, M. Molendowska, T. Pieciak, and R. Luis-García, "Return-to-Axis Probability Calculation from Single-Shell Acquisitions", Computational Diffusion MRI: Springer, pp. 29-41, 2019.
Aja-Fernández, S., A. Tristán-Vega, R. de Luis-García, and D. K. Jones, "Alternative Diffusion Anisotropy Metric from Reduced MRI Acquisitions", Computational Diffusion MRI: Springer, Cham, pp. 13–24, 2020.
Aja-Fernández, S., A. Tristán-Vega, and D. K. Jones, "Apparent propagator anisotropy from single-shell diffusion MRI acquisitions", Magnetic Resonance in Medicine, vol. 85, issue 5, pp. 2869-2881, 2021.

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